category: Sequence - DNA Sequencing
programs:
artemis - DNA sequence annotation tool
blreads - Process and analyze DNA sequencing reads
cd-hit-454 - Identify duplicates from 454 reads
cd-hit-div - sort and divide sequence database into shorter files
cd-hit-dup - remove duplicates from sequencing reads
cd-hit-lap - Identify overlapping reads
FastQC - A quality control tool for high throughput sequence data.
gde - Genetic Data Environment
pollux - DNA sequence read correction for all sequencing platforms
quast - Evaluate genome assemblies
sequin - Annotate and submit sequences to GenBank
TraceView - Sequence chromatogram viewer